rs32875120 SNP Detail

Summary

• ID
  rs32875120
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135665162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTAGCCCA TGACACATGA
  AGATTTACCG AGCTCTAAGT GCAGCTTTTA TTCTATAGAG GACTTGAAAT TACTTATATC
  AACTTAGAAA TCCTGCAAAA TCATTAGGAA TTATGGAGTC ATTAATTCGT CTGTCCAGCA
  TTACTATGTG AAAGTACATC TTCATGTTGG CCTGCAGAAA GTCTGCCCAA ATAGGGTGGG
  M
  TAATGCCCAG GAGTCCTTAG GCTGTGTAAT AGTGACAGGA AAGCGTATCA GCAGAGAGAC
  CCAATCCCGG GATGAAGTCT CTAAGGACCC TGCCTGCTTG GAGCCCACCC GTTGCTGGCC
  GTGCAGAATG ACAAGCTAGC TCCAGGAGAC ACTTGCCAGC CTTTCGCCTT TCCTACATGG
  CTCCCTGCAC CCTCCTAAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45706806	mCV22566168	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss147554374	ENSMUSSNP193608	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321353517	CHEV_4_135493766	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32875120					SNP	C	C	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135665162 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fuca1	fucosidase, alpha-L- 1, tissue			Intron
				Noncoding-Transcript-Variant
Rr602205	regulatory region 602205			1264 bp proximal
Rr602206	regulatory region 602206			1298 bp proximal