rs32874189 SNP Detail

Summary

• ID
  rs32874189
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:95784470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTAATTA ATGCCCAGGC
  ATTCACTGAA CACACGGATA AACTGAGCTC TGTGCTTGGT ACTGAGGTTC AATCAAAGCA
  GAAACATGTC TGTAGTTACT ACAGGGGCTT GTAGGCTATA TATCCCCTTA AAACAGAAAT
  ATCACACTAT GAATAAAAGT AGGGAGACAC TGAAAAATTA AGGACTTAAA AACTAACACA
  R
  TTGGCAGAGT GGTAAAACAT CTCAGGAAGG AGTCTTGTGT GAGCTAAGTT GTATAGAAGG
  AGCAGCGCTT AGGTCAGGTG AAAGGGACTG ACCCTGAGAA GGAGCCCCAC AGACTTGCTG
  AACTAGGAGT CAGACTTTGT AGAAAGTGAT TTTCTTCAGC TTCCTCCTGT TCCACGAAAG
  GCATGTCACT GTTAATTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45706404	mCV22849042	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss147068281	ENSMUSSNP6225356	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss321216042	CHEV_4_95562924	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32874189					SNP	G	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:95784470 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fggy	FGGY carbohydrate kinase domain containing			Intron
				Noncoding-Transcript-Variant
Rr595485	regulatory region 595485			694 bp distal
Rr595486	regulatory region 595486			155 bp proximal
Rr595487	regulatory region 595487			1075 bp proximal
Rr595488	regulatory region 595488			1098 bp proximal
Rr595489	regulatory region 595489			1231 bp proximal