rs32869015 SNP Detail

Summary

• ID
  rs32869015
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131873762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTTTTCT TTCGAATACT GTATAGTCCT AGCTGTCCTA
  GAACTCACTC TGTAGACCAG GCTGGCCTTG AACTCAGAAA TCTGCCTGCC TCTGCCTCTC
  R
  AGTGCTGGAA TCAAAGGTGT GTGCCACCAC TGCCCAGGAG AAACACACTT TGAATTTTAC
  CTTTCAACAC TGCAGACTTC CACATGCAGA CTGCACAGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45205472	mCV23344112	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss147616111	ENSMUSSNP7172907	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320508276	CHEV_2_131857578	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32869015					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131873762 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12299	CpG island 12299	1320 bp distal
Gm31179	predicted gene, 31179	within coordinates
Gm75461	predicted gene, 75461	647 bp downstream
Rassf2	Ras association (RalGDS/AF-6) domain family member 2	1426 bp upstream
Rr397324	regulatory region 397324	1637 bp downstream
Rr565380	regulatory region 565380	1150 bp distal
Rr565381	regulatory region 565381	1777 bp distal
Tssr20294	transcription start site region 20294	1856 bp downstream
Tssr26441	transcription start site region 26441	1998 bp upstream
Tssr26442	transcription start site region 26442	1941 bp upstream