rs32863926 SNP Detail

Summary

• ID
  rs32863926
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87070971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTCGGCC ACGGAATTTT
  GTTCTCCCTT GATTCCCTGT AGAAGACAAA CAAAAGCATC CTCCCTCTCA CACCTCAATA
  GGATCCTGCA GCAGCAACAC TACCAGGGAA TCTCTGGCCA AGGCACAATC TCTTTTCCAG
  GGGTCCTTCG AAGCTTGAAA CTCTTGTCCT ACCGTAAAGA GCTGATGCTT CTGCAGTTAA
  Y
  ACCCAAGCTT ACGGTCCTGC AACGCCTCTT ATAGGATGCA GATTGGCTAC AAGTATGTGA
  TGAGGAAACC GCAGCTTACA AAGGGTAAAA GACCACTCAG TCTCCTGACA CAGAATACAG
  ACTGAATTCT AAAGCAGGGT GACACGCCCA GCCCCACCCC AGGGTCCCCC ATCCCTGAAA
  CCTCAGAGTA CAAAGTGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46739120	NES10741642	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	T	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32863926					SNP	T	C	C	C	C	C	T	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46739120	NES10741642	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87070971 () rs orientation: forward

Symbol	Name	Function Class
Gm37855	predicted gene, 37855	1209 bp downstream
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	1208 bp proximal
Rr579449	regulatory region 579449	1983 bp distal
Rr579450	regulatory region 579450	within coordinates
Rr579451	regulatory region 579451	498 bp proximal
Rr579452	regulatory region 579452	1461 bp proximal