rs32861022 SNP Detail

Summary

• ID
  rs32861022
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152517813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTCTGTG GTCGGCTGGT
  CCGAGGGTCA GCTAACGCCA GGGGAAGCTC ACTGCAGGCT TAGGTACACC TGCGCTTTAC
  CGGGTACCTT TTCAGCCTGC TGCTCTGTCC TTCCTTGCCC ACAGGCTCTC TTGAGGATGG
  GGTTCAAGTG CGAGTTTGGT TTTATTACTC AGTTTCGACC AGAAAAAAAA AACAGTATGC
  R
  TTCCTCATAT GCCACACAGA TGGACACACG CGTGTTTGCA AGCTCCAGCT CAGGTAGAAG
  TTTGTATCCC ATCAACACTG CGGTCAAGCC AGAGCCTCAC CTCTCAGACT CCCCTGTGAG
  GAACGAGGCC TCAGAGACAG TGGCAAAAGT CAGCCTGCGA ACCCAGGCGC GGCCATGATC
  TTGAGGCCAC GAGAAGAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46739430	NES10999675	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32861022					SNP	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46739430	NES10999675	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152517813 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2			Intron
				Noncoding-Transcript-Variant
Rr605873	regulatory region 605873			747 bp distal
Rr605874	regulatory region 605874			867 bp distal
Rr605875	regulatory region 605875			820 bp distal
Rr605876	regulatory region 605876			1405 bp proximal
Rr605877	regulatory region 605877			1664 bp proximal