rs32858611 SNP Detail

Summary

• ID
  rs32858611
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75512535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACTCCGGC CAACCCCGCT CGCTCAGTCC CTGTTTGCTC
  TGGCCCAAGA TTTATTTATT ATTATACAGA AGTACACTGT CGCTGTCTTC AGATGTACCA
  R
  AAGAGGGCGT CAGATCTCAT TATGGGTGGC TGTGAGTCAC TATGTGGTTG CTGGGATTTG
  AACTTAGGAA CTTCAGAAGA GCAGTCAGTG CTCTTACTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45203996	mCV25010630	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss320351241	CHEV_2_75520248	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32858611					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75512535 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Nfe2l2	nuclear factor, erythroid derived 2, like 2	Intron
Rr367218	regulatory region 367218	109 bp upstream
Rr559542	regulatory region 559542	332 bp distal
Rr559543	regulatory region 559543	within coordinates
Rr559544	regulatory region 559544	281 bp proximal
Rr559545	regulatory region 559545	485 bp proximal
Rr559546	regulatory region 559546	571 bp proximal
Tssr18460	transcription start site region 18460	1008 bp upstream