rs32857379 SNP Detail

Summary

• ID
  rs32857379
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59260771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACGTACACT TGGGTTGATA AAAGCCCGAC GTGTGCACCA
  CGAAGATGGA CCAGGCAAGC CTTGCTAATG GACTGAACAT GGAGGGAGGG AGAGAAATGG
  R
  GGGGGGGGGG TGCCAGGAAA GCCACTGTCC ACATCAGTTT CCTTTTGATG CTGTGGTAAA
  ACTCAGCAAC CTAAGAAAGA TGAGCTTGTT TGGTGTTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45704244	mCV23536426	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss146400904	ENSMUSSNP1436861	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32857379					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59260771 () rs orientation: forward

Symbol	Name	Function Class
Gm12596	predicted gene 12596	within coordinates
Gm68876	predicted gene, 68876	852 bp upstream
Gm68878	predicted gene, 68878	within coordinates
Rr367634	regulatory region 367634	623 bp upstream
Rr398285	regulatory region 398285	184 bp upstream
Rr593020	regulatory region 593020	710 bp distal
Rr593021	regulatory region 593021	757 bp distal
Rr593022	regulatory region 593022	257 bp proximal
Rr593023	regulatory region 593023	1451 bp proximal
Tssr37421	transcription start site region 37421	718 bp downstream