rs32856440 SNP Detail

Summary

• ID
  rs32856440
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141172051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGCC CTTTGTCTGC TGTGAAGCGC
  W
  GCCCCCGGCC TTCTCGCGGC CGTGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45703556	mCV22897644	ABI	CRAMUS_MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs32856440					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141172051 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm42337	predicted gene, 42337			Coding-NonSynonymous
Rr603768	regulatory region 603768			76 bp distal
Rr603769	regulatory region 603769			within coordinates
Rr603770	regulatory region 603770			365 bp proximal
Tssr40079	transcription start site region 40079			26 bp downstream
Tssr44320	transcription start site region 44320			689 bp downstream
Zbtb17	zinc finger and BTB domain containing 17			mRNA-UTR
				Noncoding-Transcript-Variant