rs32852564 SNP Detail

Summary

• ID
  rs32852564
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134905002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTA CTTGAAAGCA CAGGCTAGAC
  R
  GAAAGCACAA GGAACCTAGG GGGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45703699	mCV24993576	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss147540794	ENSMUSSNP271166	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss321351077	CHEV_4_134733606	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32852564					SNP	A	A	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134905002 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15065	CpG island 15065	1808 bp distal
Rr601942	regulatory region 601942	1238 bp proximal
Rr601943	regulatory region 601943	1445 bp proximal
Runx3	runt related transcription factor 3	mRNA-UTR
Tssr39605	transcription start site region 39605	1564 bp downstream