rs32852427 SNP Detail

Summary

• ID
  rs32852427
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140939280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTG TTCTTTAGCC CAGCACTCAG
  R
  AGGCAGAGGC AGGCAGATCT GTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45703404	mCV24071902	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs32852427					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140939280 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15211	CpG island 15211	1871 bp proximal
Cplane2	ciliogenesis and planar polarity effector 2	1969 bp upstream
Gm68349	predicted gene, 68349	1643 bp upstream
Rr398649	regulatory region 398649	1306 bp downstream
Rr398650	regulatory region 398650	1849 bp upstream
Rr603685	regulatory region 603685	1153 bp distal
Rr603686	regulatory region 603686	1497 bp proximal
Tssr40035	transcription start site region 40035	1334 bp downstream
Tssr40036	transcription start site region 40036	1979 bp upstream