rs32851848 SNP Detail

Summary

• ID
  rs32851848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86991134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGAAGAG AAAAGGGTAA
  ATGTGGGAAC TTCCCCCAGT GTAATAAGCT CTCCTGAGTC TTCTGCCCAT GCCCAGCTCA
  ATCCATGTCT CCTCCCCTTC TCACCATACC GGTGATTCTA TCTTCTGTTC CTTCTGCAGA
  CTTCTTGACC ACTCCTCCCT GCTGTCCTCC CCCTGCAGAT CCTCCTACCC CACGTCCCAG
  Y
  CAGCCAGTCC TTGTGCCTTG CATCAGTCCT TCCCCTCACC TTCATCTCAT ACTCTTCCCG
  GGTGTCAATG GTGTCACAGC GCAGGTCCTG CTTCAGATCC ACATCATCCT TAAAGGACTA
  AAGAACAGGT GTGGGTGTCA GGAAACAGCA TATGGTTTGC ATATACTCGA CCCAGTGAGT
  GGCACTATTA GAAGGTGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46738337	NES10744936	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32851848					SNP	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46738337	NES10744936	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86991134 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr579434	regulatory region 579434	1160 bp distal
Rr579435	regulatory region 579435	1403 bp distal