rs32851133 SNP Detail

Summary

• ID
  rs32851133
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86990228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGACTAGT GGCTGTCCCA
  CGTTCCAGCA GCCTGCCCGC CTCAGCTTAG CTCCATGCCC TCTTATGGGA GACCAGAGGA
  GCAGGCCAGA TAGGAAATGA TAAATTGTAT TCTTCTCCTC TCCCTTCTCC TCCCCTTCCC
  CAACCTCCCC TCTCCTTTCC CCATGCTTGG GTCAGGCAGA GCAAAGGTCA GAAGAGACAT
  Y
  CTCCTGAAGG AGAGGAAAGG GCAGGCCCGG GAGACTGGGG CCTGCGCAGA GCACCATCCT
  TGGGATGGGA TGTTACTGGG AGACCTGCTC CTCATTTGTG ATGGCCAGGA GGAGAAAGGC
  TGGGTCCATG AAAGGAGCAA TGAGCAATGT CCCTGAATGT CAGGGAACAG CTGGGAAGCC
  ATCTCCTCTG CCCCGCAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss46738331	NES10744934	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs32851133					SNP	T	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46738331	NES10744934	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86990228 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	mRNA-UTR
Rr579434	regulatory region 579434	254 bp distal
Rr579435	regulatory region 579435	497 bp distal