rs32847554 SNP Detail

Summary

• ID
  rs32847554
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:48402091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCAAACT CAAGTCATCA
  GGCTTGGTGG CAAACAACTT TTTAAAAACT CTTTTGTGAT ATTGAAAATC TTAAATATAG
  GCTATTCGTA TTAGTCAGGG TTCTCTAAAG GAACAGAACT GATGAAATGA ATATATATTC
  ATATATATGA ATGCATTTAT ATATGTGAAT ATACTCATTT ATTCATTCAA TTTTCCATAC
  R
  CACATATACA TATATACATA TATAATAAGC CATTATTAAA TTGGCTTACT GACTGTGGTT
  CAGCTACTCC AACAATAGCT ACCTATCAAT AGAAAGTTCC AGAATCAAGT AGTTGTTCAG
  TCCACAAGGT TGGATGTCTC AGCTCGTCTT CAGTGTACAC CAGACTCTTG AAGAAGTAGA
  CTCTGATTCC AGTAATAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45702811	mCV23268769	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32847554					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48402091 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm68641	predicted gene, 68641			within coordinates
Invs	inversin			Intron
				Noncoding-Transcript-Variant
Rr591970	regulatory region 591970			930 bp proximal
Rr591971	regulatory region 591971			1182 bp proximal