rs32845268 SNP Detail

Summary

• ID
  rs32845268
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119595065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCGCAGAG GGGAGGCCCC
  GATCCAGAGC AGCAGCCTCA CTTCCCCACT TACTGATGGA AGACACAGGC ACTCTAGGCA
  CGAAGAGTTG GGGGTGTAAA GGGCGATTAT TTTGATGTTG TTGCCCAGAG AAGGGGTGTA
  AGTCTGACTG TTTTGAAGTG GAACCATTAG AACACGTTGG TATTTCTTTT TCTGTGATTT
  R
  GTTGGAGAAT GTTCTTGTAG GAACTCTGTT CTCTGGTGAC CCTGTTAAAC CAGTGCTGGA
  GAGCCCATGT GCATCCTGTG GGTGCTGGGG AAGTTGCCCA CCCCGGCGCT TTTCTTTTCT
  GCTGAAACTC AAACTGTGTG CTGCTGTGAG AGGCTGGGTG AGATGTTTGA ATGACCACAC
  TGACTGGAAA ACAGGATAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45701982	mCV24641863	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147334949	ENSMUSSNP1701586	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32845268					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119595065 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Hivep3	human immunodeficiency virus type I enhancer binding protein 3			Intron
				Noncoding-Transcript-Variant
Rr598641	regulatory region 598641			626 bp proximal