rs32845252 SNP Detail

Summary

• ID
  rs32845252
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148149045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCAAGATC CACACAGCAG
  AAGATAAAAG AGCAGAGACC CACCCAGTCC TAGGTGTACC CTCCGTGATC CAATCCTGGG
  CTCTGAGATG GCTCTGGAAC GGAGTGTCAC TAAGGGACCC TTCTGGTCTT CTCCTCTCCC
  AGGTGTCCCC ACCCAGTCCT TGGCTCCCTC TATCAGCAGG AGAGCCAGTG GCTCAGGCCA
  Y
  TCGCACCAGT CCCTGGCCTC GCTCCTGGAC TCTCCTGCAC TGTCCACCAT CCCGCCAGCA
  GCTGCTTCCA CAGACCCATC ACAGCCCCAC AGTTCCAATT CCAGGCCCAG CGAGCAGCCA
  GCTCTCCCTG GGCCCGTGGA GTACCGCTGC TCCAGCTGAG GAGGACACTG GGGAGGAGGG
  GGAATATCCG CTCTGAGCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45702230	mCV23437575	ABI	CRAMUS_MOUSE	f	SNP	T		C	C
ss147991177	ENSMUSSNP3979288	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32845252					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148149045 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Rr604572	regulatory region 604572	1243 bp proximal
Rr604573	regulatory region 604573	1381 bp proximal
Rr604574	regulatory region 604574	1619 bp proximal