rs32844605 SNP Detail

Summary

• ID
  rs32844605
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152220565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAAAGGACC CTAGGGCTGT CTACTGGAGG AGGAGGAAGG
  ATACATTTAA CTTCCATTGC CTGGCTGCAA CCTAACTTGC TTGAGCTGCC AGCTGCCTAC
  Y
  CAATGCCAGT GCACCTCCTG ATGGTGCTGC GGGGAAAGGC TGGGCCCTAG ATGGGATGTG
  CCTGCTGAGG CTGCCAGGTC TTTCATCCTC CCTCCCACCA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46736688	NES10987561	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32844605					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46736688	NES10987561	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152220565 () rs orientation: forward

Symbol	Name	Function Class
Espn	espin	Intron
Gm69804	predicted gene, 69804	within coordinates
Rr605754	regulatory region 605754	8 bp proximal
Rr605755	regulatory region 605755	366 bp proximal
Rr605756	regulatory region 605756	584 bp proximal