rs32843393 SNP Detail

Summary

• ID
  rs32843393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152220267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTCCAGCT GCTTTGCCTC
  CAGGTCCATG GATTGATCCC GGGACAAGAC TCGGTGTTCC AAGCTCTGAG GGAAAAGGAG
  GGAAGTTTTG GGCTCCAGCG TCCTGTGGGG ATAACTTCCA GGCCAGGCCT ATCCAGACTC
  CTATTCAGAG TCCTCCCTGA GCAACCAGCT GAGGCACTTC CTGACTTCTG CACCATTTCC
  R
  CTTCTTCCTA GGTCAGGAGT CAAGAGCAGA CACTTCCACT TGCACTTCAG GCCTCAGAGA
  AATGCCCAGC TGGCTCTCCC CAGGCTCAAG ACACTTGTGA AGGAGGGTCT GGCCTGCACC
  CCAAAGGGAT GCAGCCCTGC ACCTGTCACT CCCCTCTAAT CAGAGGGCAG AAGGCTTTGT
  CTCCTATGCA TCTGTGGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46736676	NES10987555	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32843393					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46736676	NES10987555	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152220267 () rs orientation: forward

Symbol	Name	Function Class
Espn	espin	Intron
Gm69804	predicted gene, 69804	within coordinates
Rr605754	regulatory region 605754	306 bp proximal
Rr605755	regulatory region 605755	664 bp proximal
Rr605756	regulatory region 605756	882 bp proximal