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rs32843385 SNP Detail
Summary
  • ID
    rs32843385
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr4:152220211 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCAGGTCAAA GGTCATTGGC
    TGGACCGACA TGGTGGTGTT GGGCGAGGAC ATACCCGAGT CCAGCTGCTT TGCCTCCAGG
    TCCATGGATT GATCCCGGGA CAAGACTCGG TGTTCCAAGC TCTGAGGGAA AAGGAGGGAA
    GTTTTGGGCT CCAGCGTCCT GTGGGGATAA CTTCCAGGCC AGGCCTATCC AGACTCCTAT
    Y
    CAGAGTCCTC CCTGAGCAAC CAGCTGAGGC ACTTCCTGAC TTCTGCACCA TTTCCACTTC
    TTCCTAGGTC AGGAGTCAAG AGCAGACACT TCCACTTGCA CTTCAGGCCT CAGAGAAATG
    CCCAGCTGGC TCTCCCCAGG CTCAAGACAC TTGTGAAGGA GGGTCTGGCC TGCACCCCAA
    AGGGATGCAG CCCTGCACCT                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss46736667 NES10987549 PERLEGEN MM_PANEL2 f SNP T T T T T C T T T C T C T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs32843385 SNP T T T T T C T T T C T C T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46736667 NES10987549 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:152220211 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Espn espin Intron
Gm69804 predicted gene, 69804 within coordinates
Rr605754 regulatory region 605754 362 bp proximal
Rr605755 regulatory region 605755 720 bp proximal
Rr605756 regulatory region 605756 938 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory