rs32840002 SNP Detail

Summary

• ID
  rs32840002
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148255796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGACTTTCA AGTATCCCAG
  GCTGGCCTGA GGCTGACATT GAATGTCTGC TTCTCCTGCC TCTGCTCTTT GGTCCTGGAA
  TTGCAGGTGT GTACCACCAT GCTTGGTTTA GGTTCAGGCC TGAACCTACA GGGGGTTGGA
  GGTGGTCTTT AGATCTGGGG TGCTCCTGCA CCCCAGCAGA GCCCTGGGCC TTCTTCAAGC
  Y
  CCCTCGGCTG AAGAAAGCTT AGGATACCCA GACAGATCCT ATTTCATCTC CTAGTGAGTC
  CACTGTCCCC CCCCCCCTTC CCCCAAATTA AACCTAATCT TGTGTTGACT CTGCTGAGCA
  GGGAGAATAA TGCAGGAGAT TAAGACAAGA TGGTATTCAG TCTCCTCCAA CAAAAGCCAA
  TTAATTGCTG GTAGGATTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45701446	mCV23437578	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32840002					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148255796 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15298	CpG island 15298	1384 bp distal
Gm68449	predicted gene, 68449	1554 bp upstream
Rr604615	regulatory region 604615	within coordinates
Rr604616	regulatory region 604616	357 bp distal