rs32839122 SNP Detail

Summary

• ID
  rs32839122
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150205595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTCAGTG CAGTGTTTGT
  AGACAGATGC CCGTTAGGAA TCCTGCCACC GGAACAGCTC TCGGAAAGTG CCTGAAACGG
  GGCTGGTGAG TATGGTTCTG CTCGTAGAGT ACTTACCATG GGTCCAGAAA GTCCAAGGTG
  AAGCAGGTAT GGCTCACGCT TGTGCCTTAG CCCTTGGGAG GTAGAGGTGG GAGATGAGGA
  R
  TTTGAGGTTA ATCTCAGCCA CAAAGGGAGT TCAAAGCCAG CCTAGGATAA AGACCCTGTT
  TGTCAAAAAA AAAAAAAAAT TTTTTTTTCC TTTCTCTTCC AAACTCACAG TGTAAGTAGG
  GATTAGGTGT AGATTTCCTT GGTTGAGAAA AATTTCCAGC GCCAAGAAGG TAACATGAGC
  TGGGCAGTGG TAGCGCACGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45701798	mCV24960464	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32839122					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150205595 () rs orientation: forward

Symbol	Name	Function Class
Gm13093	predicted gene 13093	1875 bp upstream
Rr605186	regulatory region 605186	1886 bp distal
Rr605187	regulatory region 605187	1845 bp distal
Rr605188	regulatory region 605188	1646 bp distal
Rr605189	regulatory region 605189	165 bp distal
Rr605190	regulatory region 605190	955 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40372	transcription start site region 40372	1807 bp downstream
Tssr40373	transcription start site region 40373	1789 bp downstream
Tssr40374	transcription start site region 40374	433 bp downstream