rs32837621 SNP Detail

Summary

• ID
  rs32837621
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAACTCA CTCTGTAGAC
  CAGGATGGCC TCGAACTCAG AAATCCGCCT GCCTCTGCTT CCCGAGTGCT AGGATTAAAG
  GCGTGCGCCA CCACCGCCTG GCTGCCATCA GCCCTCCTTA CTCCTAGACT TGTCACCCTG
  TCCCTGAGCT TGAACTGGAA TGCATCAGTT CTGTGCTGCG CAGACGTTGC AGGTTCTATC
  S
  GGAGCCTCTG AGCATCCCTC CAAAAACGGA GAGGTCCTCG AAATGCTTAA GGAGAGTGCA
  CTGCCTCTGG CTGCCTGGGA CCTCCGTGTT ACACAGTGCA GGGACCCGGT TCCTTGGATG
  GGTGTGCTCC GTCGGGTCTC TGACGTGACT GGGCCGACCG TGACCCTTGT GTCCACTGTA
  GGACAGGCGT TTACGGGCAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46735629	NES10985471	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32837621					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735629	NES10985471	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062020 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605684	regulatory region 605684	1832 bp distal
Rr605685	regulatory region 605685	1918 bp distal
Rr605686	regulatory region 605686	351 bp proximal
Rr605687	regulatory region 605687	1096 bp proximal
Rr605688	regulatory region 605688	1283 bp proximal