rs32837618 SNP Detail

Summary

• ID
  rs32837618
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152061997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTGTGT AGCCCTGGCT
  GTCCTGGAAC TCACTCTGTA GACCAGGATG GCCTCGAACT CAGAAATCCG CCTGCCTCTG
  CTTCCCGAGT GCTAGGATTA AAGGCGTGCG CCACCACCGC CTGGCTGCCA TCAGCCCTCC
  TTACTCCTAG ACTTGTCACC CTGTCCCTGA GCTTGAACTG GAATGCATCA GTTCTGTGCT
  R
  CGCAGACGTT GCAGGTTCTA TCCGGAGCCT CTGAGCATCC CTCCAAAAAC GGAGAGGTCC
  TCGAAATGCT TAAGGAGAGT GCACTGCCTC TGGCTGCCTG GGACCTCCGT GTTACACAGT
  GCAGGGACCC GGTTCCTTGG ATGGGTGTGC TCCGTCGGGT CTCTGACGTG ACTGGGCCGA
  CCGTGACCCT TGTGTCCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss46735626	NES10985470	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G	G	G	G	G		G	G	G		G
ss321433785	CHEV_4_151351649	CHEVERUD	SCREENING_POP	f	SNP											A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32837618					SNP	A	G	G	G	G	G	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735626	NES10985470	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152061997 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605684	regulatory region 605684	1809 bp distal
Rr605685	regulatory region 605685	1895 bp distal
Rr605686	regulatory region 605686	374 bp proximal
Rr605687	regulatory region 605687	1119 bp proximal
Rr605688	regulatory region 605688	1306 bp proximal