rs32834080 SNP Detail

Summary

• ID
  rs32834080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144131924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAT GACTTAACTA AAATAAAGGT
  R
  AGCCATTTCT CATGTCACAC GTACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45700684	mCV24102939	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147823052	ENSMUSSNP3996319	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss321408462	CHEV_4_143995257	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32834080					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144131924 () rs orientation: forward

Symbol	Name	Function Class
Pramel13	PRAME like 13	Intron
Pramel13os	PRAME like 13, opposite strand	within coordinates
Rr604225	regulatory region 604225	476 bp distal
Rr604226	regulatory region 604226	309 bp distal
Tssr40137	transcription start site region 40137	1604 bp downstream
Tssr44454	transcription start site region 44454	1714 bp upstream