rs32833478 SNP Detail

Summary

• ID
  rs32833478
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:164657777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCTAAGC AAGTAGCTGT
  GTTGGGGAGG AACAACAACA TGGATAAAAC TGGCTCTTTT TGGCAGGGAG ACTGGAGGAT
  GTTGGGTTGA CAAGCAACAG CTTTTGGATT AGATGAAATT ATGATTGTGT CCGTCCCCCT
  CCACACACAC ACACAAACAT GTCAGGAGGT GGGTAGGCTC TGGGATGCCC CTCACACACA
  K
  GTCAGGAGGT GGGTAGGCTC TGGAATGCCC CTCACACAGC AAAACCATTG GCCTCTCAAG
  CCTCTGATCT AAAGTGGCAT AGTTCTCACA TATACTGTCC GCGTAACCGC CGCCGTGCAC
  CGTGGAGATA GCCATTATAG TGCACTCTAG TGACTAGTGA TAAGGGAAGC ATCTGTCTAT
  TTTCAGAACA AGTACAAACT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45201021	mCV22942113	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32833478					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164657777 () rs orientation: forward

Symbol	Name	Function Class
Rr569717	regulatory region 569717	257 bp distal
Rr569718	regulatory region 569718	within coordinates
Rr569719	regulatory region 569719	137 bp proximal
Rr569720	regulatory region 569720	1856 bp proximal
Rr569721	regulatory region 569721	1868 bp proximal
Rr569722	regulatory region 569722	1942 bp proximal
Zswim3	zinc finger SWIM-type containing 3	Intron