rs32832913 SNP Detail

Summary

• ID
  rs32832913
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152369065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTGCTGT GAAGGCTGCT
  GGTGCCTATC GCAGAGAACC AAAGCTCGTG GAAGTGGACT TTCGTGTCTC AGTGCCCATC
  TCCAGTTTTG CCTCCCACAG GCAAAGTCCT TGGAAAGGGT GTCCTGTACC CCACTTCCCC
  TGCAAGAAGG GCTTTGCTCT CTCCTGGGTC TGGGCTGTGC CAGGGACATG GGTATTCCCA
  K
  GAGAGTCTGG GAGCTGGGAG CAGAGGGGGA GAGCTGTCAC CAGACAGCGG ACCCTCTGTG
  TTGGGACCTG GAGATAGTCT TAAGGCCAGC ACAGAACCAG CCTGTGTCTC CTTGTTCTTG
  AGACGTGGTG GACAGGCCTG TCTCCTCTCC CTCTGCAGAC AGATTTCCAA CCACAGCTGG
  GGATGAGGGA GGAGGGCTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45700374	mCV23461091	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss148080303	ENSMUSSNP6051959	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss321434063	CHEV_4_151658717	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs32832913					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152369065 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi15403	CpG island 15403			536 bp distal
Cpgi15404	CpG island 15404			1490 bp proximal
Gpr153	G protein-coupled receptor 153			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Hes3	hes family bHLH transcription factor 3			1364 bp downstream
Rr605825	regulatory region 605825			1213 bp distal
Rr605826	regulatory region 605826			597 bp distal
Rr605827	regulatory region 605827			1087 bp proximal