rs32830530 SNP Detail

Summary

• ID
  rs32830530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151987696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTGTAGG AAGCCGCTCT
  CAGGACACCT GCAGAGGTGA AGTTCAAATG GCTTATGCTC CTTTATATGA TCCTCTCTAA
  CATGCACAAG AACCGTGGGC GATCTGGTCA GGATACAGAA GGTGTGCCAC ACAGCCTGGA
  CCTGACCCAT TTAACAAGGG CTCGGGTGTG CCAAAGCAGC TGGCCCACGC GGAGAGGAAA
  Y
  AAAATCTTAG CAGGCAGAGA GCATTCATTG CAGGACACGG GTTGGGGGAC AGGCATGGTG
  ATTCCCTGTC TTAAGGACTA CAGGGCATCT CCTGAAACCT GTCTTCACCT TGCAGGTTGG
  CTGGCATTGG AGCAGATGTC ACAAAGCTCT GAGCCTGTTA GTGTGGAAGA ATAGGACTCT
  CCGCTCAGCA CCTCATTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46734969	NES10988194	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs32830530					SNP	T	T	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46734969	NES10988194	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151987696 () rs orientation: forward

Symbol	Name	Function Class
Rr605663	regulatory region 605663	1519 bp distal
Rr605664	regulatory region 605664	1599 bp distal
Rr605665	regulatory region 605665	within coordinates
Rr605666	regulatory region 605666	809 bp proximal