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rs32830524 SNP Detail
Summary
  • ID
    rs32830524
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr4:151987555 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ACAGAGTTAG CATCCAGAAG
    AACTGGCCAG GTTCCCAGCC TACAACCCCA GAGACACCAC CCTGCGCCCA GCCTTGGGAC
    TCCGTAGAGC TACTAGCCAG GGCTGCAGGA AGCCACGCCC AAGCTTCAAG AAACCACGCC
    CAGGCTGTAG GAAGCCGCTC TCAGGACACC TGCAGAGGTG AAGTTCAAAT GGCTTATGCT
    M
    CTTTATATGA TCCTCTCTAA CATGCACAAG AACCGTGGGC GATCTGGTCA GGATACAGAA
    GGTGTGCCAC ACAGCCTGGA CCTGACCCAT TTAACAAGGG CTCGGGTGTG CCAAAGCAGC
    TGGCCCACGC GGAGAGGAAA TAAAATCTTA GCAGGCAGAG AGCATTCATT GCAGGACACG
    GGTTGGGGGA CAGGCATGGT                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
MOLF/EiJ
PWD/PhJ
ss46734963 NES10988192 PERLEGEN MM_PANEL2 f SNP A C C C C C
ss148078228 ENSMUSSNP5146491 ENSEMBL ENSEMBL_Sanger f SNP A C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
BALB/cByJ
C3H/HeJ
CAST/EiJ
DBA/2J
MOLF/EiJ
PWD/PhJ
rs32830524 SNP A A C C C C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46734963 NES10988192 PERLEGEN MM_PANEL f SNP A/C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:151987555 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr605663 regulatory region 605663 1378 bp distal
Rr605664 regulatory region 605664 1458 bp distal
Rr605665 regulatory region 605665 within coordinates
Rr605666 regulatory region 605666 950 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory