ACAGAGTTAG CATCCAGAAG AACTGGCCAG GTTCCCAGCC TACAACCCCA GAGACACCAC CCTGCGCCCA GCCTTGGGAC TCCGTAGAGC TACTAGCCAG GGCTGCAGGA AGCCACGCCC AAGCTTCAAG AAACCACGCC CAGGCTGTAG GAAGCCGCTC TCAGGACACC TGCAGAGGTG AAGTTCAAAT GGCTTATGCT M CTTTATATGA TCCTCTCTAA CATGCACAAG AACCGTGGGC GATCTGGTCA GGATACAGAA GGTGTGCCAC ACAGCCTGGA CCTGACCCAT TTAACAAGGG CTCGGGTGTG CCAAAGCAGC TGGCCCACGC GGAGAGGAAA TAAAATCTTA GCAGGCAGAG AGCATTCATT GCAGGACACG GGTTGGGGGA CAGGCATGGT M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
MOLF/EiJ |
PWD/PhJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46734963 | NES10988192 | PERLEGEN | MM_PANEL2 | f | SNP | A | C | C | C | C | C | |||
ss148078228 | ENSMUSSNP5146491 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | C | C | ||||||
SNP Consensus Information | ||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
MOLF/EiJ |
PWD/PhJ |
||||
rs32830524 | SNP | A | A | C | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46734963 | NES10988192 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr4:151987555 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr605663 | regulatory region 605663 | 1378 bp distal | ||||||
Rr605664 | regulatory region 605664 | 1458 bp distal | ||||||
Rr605665 | regulatory region 605665 | within coordinates | ||||||
Rr605666 | regulatory region 605666 | 950 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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