rs32830524 SNP Detail

Summary

• ID
  rs32830524
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151987555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGTTAG CATCCAGAAG
  AACTGGCCAG GTTCCCAGCC TACAACCCCA GAGACACCAC CCTGCGCCCA GCCTTGGGAC
  TCCGTAGAGC TACTAGCCAG GGCTGCAGGA AGCCACGCCC AAGCTTCAAG AAACCACGCC
  CAGGCTGTAG GAAGCCGCTC TCAGGACACC TGCAGAGGTG AAGTTCAAAT GGCTTATGCT
  M
  CTTTATATGA TCCTCTCTAA CATGCACAAG AACCGTGGGC GATCTGGTCA GGATACAGAA
  GGTGTGCCAC ACAGCCTGGA CCTGACCCAT TTAACAAGGG CTCGGGTGTG CCAAAGCAGC
  TGGCCCACGC GGAGAGGAAA TAAAATCTTA GCAGGCAGAG AGCATTCATT GCAGGACACG
  GGTTGGGGGA CAGGCATGGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss46734963	NES10988192	PERLEGEN	MM_PANEL2	f	SNP	A			C	C	C		C	C
ss148078228	ENSMUSSNP5146491	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs32830524					SNP	A	A	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46734963	NES10988192	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151987555 () rs orientation: forward

Symbol	Name	Function Class
Rr605663	regulatory region 605663	1378 bp distal
Rr605664	regulatory region 605664	1458 bp distal
Rr605665	regulatory region 605665	within coordinates
Rr605666	regulatory region 605666	950 bp proximal