rs32829166 SNP Detail

Summary

• ID
  rs32829166
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151983474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTCCCTG CTCAGGCCTG
  AGCCAGGGTA ATGACTGATA CACATAGTTT ACCCCCAACC AGCCGAGAGA TCAAAGTGAC
  ACTTTGTCAA AAATGGAATG GCGTAAGGAG TTAACTGTAA AATTAATTAA ATGTCATGCA
  CTCAAAAACA GGACAGACGG GAACGAGAGT GGAACCACAA CCAGGCAGTC AGCACGCGGC
  Y
  TTCACATGCT CTTCTGTATT GCCCCCCTAC TGTGCCAAGA AATTAGGGGT TTGTGCTGGC
  ATCCCTGGTA CCTCTCCTTG GCTTCTATTG CTGAAATCCC AAGCCTCTCC TCTCCTGGGT
  CGGACGCGTG GCTCAGCTAA CACACAGACC AGACAGCTAT TTGATCTGGG ACTCAAAAAA
  AAAAAAATTT TTTTTGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss46734945	NES10988315	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs32829166					SNP	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46734945	NES10988315	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151983474 () rs orientation: forward

Symbol	Name	Function Class
Rr605658	regulatory region 605658	1556 bp distal
Rr605659	regulatory region 605659	within coordinates
Rr605660	regulatory region 605660	863 bp proximal
Rr605661	regulatory region 605661	1171 bp proximal
Rr605662	regulatory region 605662	1325 bp proximal