rs32828670 SNP Detail

Summary

• ID
  rs32828670
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151983377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCTGTAC TGAGCCTCTT
  CCAGGAACCT GTCTATAAAC GGAATCCTTG TCTCCGCATC CCGCCTGCTG CTGTCCCTCG
  AATCTCCTGC TGTGGCAGAT GTCCCTGCTC AGGCCTGAGC CAGGGTAATG ACTGATACAC
  ATAGTTTACC CCCAACCAGC CGAGAGATCA AAGTGACACT TTGTCAAAAA TGGAATGGCG
  K
  AAGGAGTTAA CTGTAAAATT AATTAAATGT CATGCACTCA AAAACAGGAC AGACGGGAAC
  GAGAGTGGAA CCACAACCAG GCAGTCAGCA CGCGGCTTTC ACATGCTCTT CTGTATTGCC
  CCCCTACTGT GCCAAGAAAT TAGGGGTTTG TGCTGGCATC CCTGGTACCT CTCCTTGGCT
  TCTATTGCTG AAATCCCAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss46734939	NES10988313	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs32828670					SNP	T	T	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46734939	NES10988313	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151983377 () rs orientation: forward

Symbol	Name	Function Class
Rr605658	regulatory region 605658	1459 bp distal
Rr605659	regulatory region 605659	within coordinates
Rr605660	regulatory region 605660	960 bp proximal
Rr605661	regulatory region 605661	1268 bp proximal
Rr605662	regulatory region 605662	1422 bp proximal