rs32827343 SNP Detail

Summary

• ID
  rs32827343
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148655714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGACAGTCAT AAATTAAGCC TTATCATTTA TGGCCTTTTT CATAATTTGA TAGCAAATAA
  CTAGGTCCTT TACTGATTGT AATAAAGCAG TTAATCTGGT AGAGTGAGTT GGAGTAGGGA
  CCTTGGCGTA GAGAGCTGGC AGTGAAAACC CAAACCTGAA GCCATCACAC CCTGTGTGCG
  CGTGGTTGGA CCAGTGTGGG AAGGGTTGTA GGGAAGCAGC AGAGAGGCTC ACAGCACTCA
  GCAGGAGATG TCACAGTGCT GCCAGTTACT GCTGAGCCTA GGGACTGTGG AGGAGCTGTC
  Y
  GCATGGCCAG CAGTTAGTTA CTCAGAGTGG GAGTTGGGTC CAGGACAGAG AACTGCAGTC
  AGAGCCTCAG TAAGAGGGAA GGAGGGGATT ATGGGTCGAC TGGGAATCCA GGAAAGTGAG
  GGAAAGACTA AAGTTTGGAT AATCCGAGGT GGAAGTTAGA CCTGTAATCC CAGCACTTGG
  ACACAGAACA GGGGGAGCAG GGGCTCACAG TTGTCCTCAG CTATCTACCG AGTTCAAGGC
  TAGCCTGAGC TTCATGAGAC CAAGATGCAC TCGCCAGCAA TAATCCGATG GTCTGAGTCC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45699963	mCV24946842	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss148011739	ENSMUSSNP3816605	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32827343					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148655714 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exosc10	exosome component 10			Intron
				Noncoding-Transcript-Variant
Gm13204	predicted gene 13204			1381 bp upstream
Rr604704	regulatory region 604704			64 bp distal