rs32826845 SNP Detail

Summary

• ID
  rs32826845
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117773861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAAGGGAGG AAGCTGGCTC TGGAAGTAGC TGCTGAGGCC
  AGAGAAGGTC GAAGAAACTT GACAAGATCT TGACGAATCC TCAAAGCCTG GGAAGGAGAA
  K
  GACTCACTTG GCTGCTAGAG GAAGTCCATC CATCACAATG AGTCAGCAAA TCGTTGTCCA
  AAAGGAAAAA AAGAAAATGT TTTAAGCGTT TTAAAGAAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45699849	mCV25045934	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss147295305	ENSMUSSNP4433635	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs32826845					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117773861 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14674	CpG island 14674	1151 bp distal
Ipo13	importin 13	1665 bp upstream
Rr398419	regulatory region 398419	1250 bp downstream
Rr598257	regulatory region 598257	1676 bp distal
Rr598258	regulatory region 598258	1697 bp distal
Rr598259	regulatory region 598259	1175 bp distal
Rr598260	regulatory region 598260	1709 bp proximal
Tssr43010	transcription start site region 43010	1952 bp upstream
Tssr43011	transcription start site region 43011	1707 bp upstream
Tssr43012	transcription start site region 43012	1646 bp upstream
Tssr43013	transcription start site region 43013	1610 bp upstream
Tssr43014	transcription start site region 43014	1489 bp upstream
Tssr43015	transcription start site region 43015	1466 bp upstream