rs32825531 SNP Detail

Summary

• ID
  rs32825531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138282259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGA GGCGTCACCA CCGGCCTGCG
  R
  GTCCTCGTGC CTCCTGCCCG CATAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45699770	mCV23281982	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss147650123	ENSMUSSNP547867	ENSEMBL	ENSEMBL_Sanger	f	SNP					G
ss321374833	CHEV_4_138110863	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32825531					SNP	A	A	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138282259 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15154	CpG island 15154	within coordinates
Cpgi15155	CpG island 15155	524 bp proximal
Rr602963	regulatory region 602963	1043 bp distal
Rr602964	regulatory region 602964	within coordinates
Rr602965	regulatory region 602965	110 bp proximal
Rr602966	regulatory region 602966	624 bp proximal