rs32823817 SNP Detail

Summary

• ID
  rs32823817
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139516478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCCCATCT GTTGAACTCA TCTTTCTCTT GGACATTCAG
  CCAGCATCAC AAAACTCAGC CTCAGGCCCC AGCCCTCTGT CCTGACCAAA TCTGACCACT
  R
  GCCCTAGTGA CAAGGACTCA CTCAGACACC CTGTCCCAGG TAGGCTGTGC ACCCACCGGT
  TTGGGGAGAA GGGAGGGAGC CGAGAGCTCA GAAGCAGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45699250	mCV25307645	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147681638	ENSMUSSNP3683177	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss321384512	CHEV_4_139345082	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32823817					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139516478 () rs orientation: forward

Symbol	Name	Function Class
Pax7	paired box 7	Intron
Rr603302	regulatory region 603302	709 bp proximal
Rr603303	regulatory region 603303	798 bp proximal