rs32822705 SNP Detail

Summary

• ID
  rs32822705
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151325688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT GTGGTTTGTG TGTGTGTGTG
  K
  GGGGGTCTGT TTTATGAAAG AGAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45698581	mCV24966958	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	G
ss148066851	ENSMUSSNP5250839	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		G
ss321432058	CHEV_4_150615340	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32822705					SNP	G	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151325688 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	Intron
Rr377429	regulatory region 377429	1274 bp upstream
Rr605547	regulatory region 605547	1601 bp distal
Rr605548	regulatory region 605548	1671 bp distal
Rr605549	regulatory region 605549	1110 bp distal
Rr605550	regulatory region 605550	559 bp distal