rs32822546 SNP Detail

Summary

• ID
  rs32822546
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135495745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGACTACA TAGTAAGACT
  CTGTAAACAA AAAACAAAAA TAAGAGCCGG GAAGTGGTGG CGCACGCCTT TAAACCCAGC
  ACATGGAAGG CAGAGGCAGG TGGATTTCTG AGTTCGAGGC CAGCCTGGTC TACAGAGTGA
  GTTCCAGGAC AGCCAGGGCT ACACAGAGAG AAATCCTGTC TCGAAAAAAA CCAAAAGGGG
  R
  AAAAAAAAAA AAGCAAAACT AAAAACAAAA ACAAAACAAA AAACCAAAAC AACAAAAAAA
  TAATAATAAG TATATAGATA GACAGGCTGG CAGACAGATA GATAGAAGGA ATAGAATATC
  AATACATCCC AGGAGATTAA CCATAGAGGC ATAGGCCTGT GATTCCTGGC TTCTGGAGGC
  TGAGGCAGGA AGGATACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45699789	mCV22670678	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss147550469	ENSMUSSNP5635855	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32822546					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135495745 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Myom3	myomesin family, member 3			Intron
				Noncoding-Transcript-Variant
Rr602132	regulatory region 602132			505 bp proximal
Rr602133	regulatory region 602133			599 bp proximal
Rr602134	regulatory region 602134			920 bp proximal