rs32821877 SNP Detail

Summary

• ID
  rs32821877
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94445099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTG GAGGCGGGGC TCGGATGCGC
  Y
  GTGCCAGCTG CTGAGGTTGT CTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45699616	mCV23923011	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147049620	ENSMUSSNP2764613	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss321211510	CHEV_4_94223553	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs32821877					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94445099 () rs orientation: forward

Symbol	Name	Function Class
Caap1	caspase activity and apoptosis inhibitor 1	66 bp upstream
Cpgi14451	CpG island 14451	within coordinates
Gm10306	predicted gene 10306	within coordinates
Rr595334	regulatory region 595334	1481 bp distal
Rr595335	regulatory region 595335	within coordinates
Rr595336	regulatory region 595336	1670 bp proximal
Tssr42441	transcription start site region 42441	1776 bp upstream
Tssr42442	transcription start site region 42442	60 bp upstream