rs32792703 SNP Detail

Summary

• ID
  rs32792703
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134999583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGGGATCT TCCCTAGACC
  ACTTTTCCCA ACTGCTGGGT TTACGGCTCC CGGGTCCCTC CTCCCCTTTA CTTTATTTAA
  CATTGTATCA AAGTTAAAGT TTCAGTTTCA CCCGGGCCAG GCGCTAGCGT TCCAGTAAGT
  TGGGTGAGCT ATCAGCCCCG CGGCCCGAGG CTGGGGCTCG CGGCGGGGTG GGGTCGGACA
  S
  GGCGAGGAGG GTGACAGTAC CCACGCGGCG CAGCTGAGGC GCGTCCCGCC CTGCGGAGTC
  GCCTCCCTGT CGCCGCGCCC GCAGGGTCCG CCAAGGTCCC GCTGCGAGGC GGGAAGGCGC
  GGAGCCCAGA CAATGGGAAT GAGCGCGGGA GGTACGGCGC CGCCTCGGGC TGCGGGGATG
  CCGCGTGGGG GCGCTTCGGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45695610	mCV25366234	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32792703					SNP	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134999583 () rs orientation: forward

Symbol	Name	Function Class
Clic4	chloride intracellular channel 4	Intron
Rr398589	regulatory region 398589	618 bp upstream
Rr601974	regulatory region 601974	1918 bp distal
Rr601975	regulatory region 601975	within coordinates
Rr601976	regulatory region 601976	594 bp distal
Rr601977	regulatory region 601977	548 bp distal
Rr601978	regulatory region 601978	177 bp proximal
Rr601979	regulatory region 601979	520 bp proximal
Rr601980	regulatory region 601980	532 bp proximal
Rr601981	regulatory region 601981	836 bp proximal
Tssr39607	transcription start site region 39607	90 bp downstream
Tssr43972	transcription start site region 43972	1104 bp upstream
Tssr43973	transcription start site region 43973	434 bp downstream
Tssr43974	transcription start site region 43974	462 bp downstream
Tssr43975	transcription start site region 43975	482 bp downstream
Tssr43976	transcription start site region 43976	509 bp downstream
Tssr43977	transcription start site region 43977	526 bp downstream