rs32788109 SNP Detail

Summary

• ID
  rs32788109
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67393472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTATCCTTA GCTTTTTTTA AACGATGTTT ACTTATACTG AGAAAATGTA CATCACCCTG
  GAAGCACAAA TGATGAGTTT TCACAAAGAT AGTTGCCACC AGGCAAGGGG GAAAGAAATT
  GTTATCAGCA CACAGCAATC TCATGTTCAA CCCAAGACCA TTTTTTATTC TGTTGAGCAG
  TTCACTGTCC ATCCCAATTC ACTTTAATAC TGTCAAAATC TGCTTACATT TGTTCGATTT
  CTTTCTAGAA CCAAAGCAAT GATACTTAAA TATTCTATTT ATTACACTGC TTATTTTGCT
  Y
  GTGGAGTTTT TCAGGTTGTT TAATATGTTG ATAATTTTTT TTCATTCCTA AATCTCTTAT
  TATGTATGTT TCACAAGTAA TGGTTTCTTC TTCTCTTTTG TGAGTGTAAC TTTTTAACAA
  TAATTTGTGG CTATTATGAA TACTATTGCT AATTCTAATA GAAATGATGA CATTGAAAAC
  TGCTACTGCT AATAGCAGTC CTGAGAGTAT TCTTATACCT CTCTGTCACT ATTCACATCT
  GCATTGTGGA TGCAAAATCG ACAACAGAAT TGCAGTTTTA TAGGGACAGT TGCTTATGAA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45694154	mCV24086213	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32788109					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67393472 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	1878 bp proximal