rs32785900 SNP Detail

Summary

• ID
  rs32785900
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144923598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGC TAAAACTGGT CTGGAACTCC
  W
  GGCCCTTCTG ACTCCGCCTC TGAAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45693476	mCV22764426	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	A
ss147848500	ENSMUSSNP6153743	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss321412803	CHEV_4_144786931	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32785900					SNP	A	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144923598 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15267	CpG island 15267	1687 bp distal
Rr398672	regulatory region 398672	1810 bp downstream
Rr604321	regulatory region 604321	1533 bp distal
Rr604322	regulatory region 604322	1920 bp distal
Rr604323	regulatory region 604323	within coordinates
Rr604324	regulatory region 604324	1712 bp proximal
Tssr44483	transcription start site region 44483	1984 bp upstream