rs32777219 SNP Detail

Summary

• ID
  rs32777219
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:94573666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGCTAATAT GCTGTCTAGT GTGCACCCTA AGACACGATG
  TTTATTATGT ACCTTAAGAA GAAAATGCAC ATTAAATATG CTCCATTCAC AAATAAAGTG
  Y
  AGTGCTATTC ACTGTGCATT AGTTATTAAC AGTGATAAAT ATTTGCTAAG CAGGATGTCC
  TTAAGAAATA TATACAATAA ATTGTATATT GGTCAAGTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45693204	mCV23203963	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss147050766	ENSMUSSNP4742626	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321211751	CHEV_4_94352120	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32777219					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94573666 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ift74	intraflagellar transport 74			Intron
				Noncoding-Transcript-Variant
Rr595348	regulatory region 595348			1802 bp distal