rs32771669 SNP Detail

Summary

• ID
  rs32771669
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100140058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGAGAGC AGAGGTCCTT
  GGGAGAGATG GGAACTCTTT GGCTATCTTA CTGATTTCTT TGCTCCTGTG CACCTAGCGG
  CCAAGTCCAT TCAGGTCTCA GGTCCTCCCT CCCTTTGCAA CCTGTGCCCA TGAACAAAAA
  CGTACTTTGC TTGCTTTGTT CCCAGTATTC AGATTCCACT GCCACCTTTT TGATTTTCTG
  Y
  TTATGAAGAT ATCTTACCAT AGTAGCAAAT AAAATTCAAA CTAAATTGTA TTAAATTCTA
  TTTTAAAAAA ATATATAAAT GTATACAATT AAAAGGATAA AATCGGTAAT TAGCAAAACA
  AATAGCAATG CCAGTAACCA GTGGTAAGCA CCCTGTTAAT GGCTTGTCAT GTGTCATCTC
  AACTGATGCT CCACAGAACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45691628	mCV22700277	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss147109115	ENSMUSSNP4123280	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32771669					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100140058 () rs orientation: forward

Symbol	Name	Function Class
Ror1	receptor tyrosine kinase-like orphan receptor 1	Intron
Rr595970	regulatory region 595970	333 bp proximal
Rr595971	regulatory region 595971	1659 bp proximal