rs32766511 SNP Detail

Summary

• ID
  rs32766511
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155833789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAAGATGC TTGAATGCCA CAAGCCAACA TCAGCAGAAG
  CAACAGGAAG TACAGTGTAT ATCCCTGAGA GGAGCTGCCC CACACCAAGA CCACAGGTCA
  Y
  GCCCTAGCAA GGATTCTTTT TTAAAAAGAT TTATTTATTG TTATATGTAA GTACACTGTA
  GCTGTCCTCA GACACACCAC AAGAGGGCAT CAGATATCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45691498	mCV22758160	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss148115244	ENSMUSSNP3186290	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss321442771	CHEV_4_155123441	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32766511					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155833789 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atad3a	ATPase family, AAA domain containing 3A			Intron
				Noncoding-Transcript-Variant
Rr606559	regulatory region 606559			73 bp proximal
Rr606560	regulatory region 606560			194 bp proximal