rs32765271 SNP Detail

Summary

• ID
  rs32765271
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151366518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCAGACAT CTATCTAGCT
  AAAACCACCT ATCAAGTCTG CAGCATGTCT CATCCCTACA TGTGGACATC TAAGCAATGG
  TGCAGATCAC GGGAACTCCT TATTTATGCT GGATCTAGAA CATTCCTACA AAACCTGGCA
  TCACCCACTA GGGCACACTA TAGCTAAGTG CGCTGCTGAC AGTCACAGGC AGGCGGAGCA
  Y
  GTGACAGATG TCTCAGATTC TATCACATCT GAGTTTCCTT CTCGGCCCTT TGAGTTTCTT
  CAGAGGCGAC GCCGTAAGAA TTCCTCGAGG CCAACTTTTG TCTGGCGCTT TGAGAAGCAT
  AGCCACACAG TTCCCCCTTT GCTCAAAAGA AGATTAGGAT ATTACGGACA GGATGTCAGC
  TCAAGATTAC ACAAGCAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46725942	NES10998466	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32765271					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46725942	NES10998466	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151366518 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	Intron
Rr605556	regulatory region 605556	1058 bp proximal
Rr605557	regulatory region 605557	1176 bp proximal