rs32757600 SNP Detail

Summary

• ID
  rs32757600
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151279682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTAGTCCA GCAGCGATAG
  GCTGGACCTG TGGCTGGTCG AGCCCTTGGG ACCCTGGGGG GGGGGGGGTT TCTGGCCGTG
  TCGAAGCCAC TTTCCAGCAG ATGACAGGTT GTCAATAAGC TCACTACCTG CATTATTTAA
  GCAGAACAAG GTGAGCTTGC CTGCGCCCTT GAGCTCAGAT CAAATTGATG GGCAGCACAG
  R
  AGCTACAGGC AATAAGATTG TTCCAAAGAG AAAGAAAGTC AGAGGGGACG GACGGACGGG
  TGTGGGGCCT GCAGCGGGGC GGGGCTCTGG TCCTCTTCTC TGTGGGTAGA GGCCTTGAGC
  TCTGGCTTCT CTCTTGGCCT CTCATTAGCG CCACCAAGCC TTGGATCTCT GTAGCGGAAT
  TGGGTGTCAG ATTTATATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46724508	NES11002350	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32757600					SNP	G	G	G	G	G	G	A	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46724508	NES11002350	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151279682 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	Intron
Rr605535	regulatory region 605535	165 bp distal
Rr605536	regulatory region 605536	1105 bp distal