rs32756746 SNP Detail

Summary

• ID
  rs32756746
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148222815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT GCATCAGTAA TGAAAACGCT
  S
  TTCAGGAGCT GGGGGGTGGG GTGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
ss45690125	mCV24936493	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss147994220	ENSMUSSNP6688199	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G
ss321417598	CHEV_4_147512467	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
rs32756746					SNP	C	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148222815 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi15292	CpG island 15292			1508 bp proximal
Mad2l2	MAD2 mitotic arrest deficient-like 2			Intron
				Noncoding-Transcript-Variant
Rr398855	regulatory region 398855			1926 bp upstream
Rr604600	regulatory region 604600			1279 bp proximal
Rr604601	regulatory region 604601			1334 bp proximal
Rr604602	regulatory region 604602			1634 bp proximal
Rr604603	regulatory region 604603			1847 bp proximal
Rr604604	regulatory region 604604			1895 bp proximal