rs32748881 SNP Detail

Summary

• ID
  rs32748881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:88725775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTCAGGTT GGGAGAGAGG AATTTCCCAT CTCATGTTTC
  ATCAAGATGG AAGCCTTTTG TCCTAGGTTC CATACAAGCT GCTAACTATA GTGTTTGTTT
  Y
  AAAAGTTCCT TCTCTCTAAA AGTCCCTTCT TTTTTACGTA TTATCAGCAG AGCGTCCTAC
  CCCTTTGGAG AAGTGATTAG CATGCATCAA TATCAATCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45689631	mCV25216808	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss146940343	ENSMUSSNP3819349	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss321203826	CHEV_4_88453442	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32748881					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88725775 () rs orientation: forward

Symbol	Name	Function Class
Gm13288	predicted gene 13288	mRNA-UTR
Rr595116	regulatory region 595116	1997 bp distal
Rr595118	regulatory region 595118	1521 bp distal
Rr595119	regulatory region 595119	1375 bp distal
Rr595120	regulatory region 595120	1033 bp distal