rs32747400 SNP Detail

Summary

• ID
  rs32747400
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101351430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGAGATAC TGACAATGGA
  AGCCAAGGGG AGTCTAGCCA GACCCATTGG GGCTGGGATA GTATTTCAGT ACTAGTTAAT
  AAGATTCAGC ACATGTAGGG TAGTATGGTG GGTTACCCAG GAAGGGACTG TCTAGTCACC
  TGGTTACACT CCTTTCTTTA GTGGTGACAG TTTTAAAGCT GTGATTTAGG AGGGGAAGGG
  R
  CATACACATA TTTCACAGAT AATTTGGATA GCAAGAATTA GATACCAAGT ATTCTAACCC
  CAGAACTTTT CCCCTGGAGT TAAGAAGTCA TAGGAACAGG CGAAACCTTG TCTAGGGAAT
  TAGTAGATTG CATGTGACCA CTATTCCTGA ATAGCTCTGT TAAATAGATG ATTTGTTCAA
  AGGGCCAGTG TCTCCAGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45689508	mCV22691436	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss147123200	ENSMUSSNP2020693	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss321230239	CHEV_4_101166838	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32747400					SNP	A	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101351430 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14501	CpG island 14501	1902 bp proximal
D4Mit176.3	DNA segment, Chr 4, Massachusetts Institute of Technology 176.3	1924 bp distal
Rr596165	regulatory region 596165	338 bp distal
Rr596166	regulatory region 596166	1925 bp proximal