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rs32747400 SNP Detail
Summary
  • ID
    rs32747400
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:101351430 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GTGGAGATAC TGACAATGGA
    AGCCAAGGGG AGTCTAGCCA GACCCATTGG GGCTGGGATA GTATTTCAGT ACTAGTTAAT
    AAGATTCAGC ACATGTAGGG TAGTATGGTG GGTTACCCAG GAAGGGACTG TCTAGTCACC
    TGGTTACACT CCTTTCTTTA GTGGTGACAG TTTTAAAGCT GTGATTTAGG AGGGGAAGGG
    R
    CATACACATA TTTCACAGAT AATTTGGATA GCAAGAATTA GATACCAAGT ATTCTAACCC
    CAGAACTTTT CCCCTGGAGT TAAGAAGTCA TAGGAACAGG CGAAACCTTG TCTAGGGAAT
    TAGTAGATTG CATGTGACCA CTATTCCTGA ATAGCTCTGT TAAATAGATG ATTTGTTCAA
    AGGGCCAGTG TCTCCAGTTT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45689508 mCV22691436 ABI CRAMUS_MOUSE f SNP A G A A
ss147123200 ENSMUSSNP2020693 ENSEMBL ENSEMBL_Sanger f SNP A G A
ss321230239 CHEV_4_101166838 CHEVERUD SCREENING_POP f SNP G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32747400 SNP A G A A G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:101351430 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi14501 CpG island 14501 1902 bp proximal
D4Mit176.3 DNA segment, Chr 4, Massachusetts Institute of Technology 176.3 1924 bp distal
Rr596165 regulatory region 596165 338 bp distal
Rr596166 regulatory region 596166 1925 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory