rs32746402 SNP Detail

Summary

• ID
  rs32746402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:117123463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGGCAGAC AGTCTGAGAA ATAAAGTGGG TCGGTGGTCA
  CAGGGAAGAC AGAAGAAGTG CTGGGGGCAG GTGCAGGGAC AGCCTCAGGG AAGGGTCCCC
  R
  CACCCCTGGC AACGAGAAGG TGGGCATGAA GAAAAAAAAA GCTTCCCAGT GGAAAACTTG
  ATTTTTCTTA AAGAGAGTAA CGCCAGCCTG TTTTATGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45689601	mCV25302135	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss147286965	ENSMUSSNP5182038	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32746402					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117123463 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr598100	regulatory region 598100			1095 bp proximal
Rr598101	regulatory region 598101			1213 bp proximal
Rr598102	regulatory region 598102			1929 bp proximal
Tmem53	transmembrane protein 53			Intron
				Noncoding-Transcript-Variant