rs32744971 SNP Detail

Summary

• ID
  rs32744971
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149409232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATC TTAAAAGAAA AACAAGGGGG
  Y
  TGGTGAGATG GCTCAGTGGG TAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45688530	mCV24954188	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148031241	ENSMUSSNP3741253	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321425392	CHEV_4_148698884	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32744971					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149409232 () rs orientation: forward

Symbol	Name	Function Class
Rr604885	regulatory region 604885	500 bp distal
Rr604886	regulatory region 604886	70 bp distal
Rr604887	regulatory region 604887	105 bp proximal
Rr604888	regulatory region 604888	338 bp proximal
Rr604889	regulatory region 604889	857 bp proximal
Rr604890	regulatory region 604890	857 bp proximal
Tssr40322	transcription start site region 40322	798 bp downstream
Tssr40323	transcription start site region 40323	783 bp downstream