rs32742769 SNP Detail

Summary

• ID
  rs32742769
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149409678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA GCAGTCAGTG CTCTTAACCG
  M
  TGAGCCATCT CTGCAGCCCC TGACT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45688249	mCV24954199	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss148031268	ENSMUSSNP2542350	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss321425393	CHEV_4_148699330	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32742769					SNP	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149409678 () rs orientation: forward

Symbol	Name	Function Class
Rr604885	regulatory region 604885	946 bp distal
Rr604886	regulatory region 604886	516 bp distal
Rr604887	regulatory region 604887	320 bp distal
Rr604888	regulatory region 604888	87 bp distal
Rr604889	regulatory region 604889	411 bp proximal
Rr604890	regulatory region 604890	411 bp proximal
Tssr40322	transcription start site region 40322	1244 bp downstream
Tssr40323	transcription start site region 40323	1229 bp downstream